diff --git a/docs/generate_examples.md b/docs/generate_examples.md
index e47b3c1..ba18b9d 100644
--- a/docs/generate_examples.md
+++ b/docs/generate_examples.md
@@ -58,14 +58,14 @@ mkdir "${TF_EXAMPLES_DIR}/eval"
 mkdir "${TF_EXAMPLES_DIR}/test"
 
 # Download the input PacBio Subread data.
-gsutil cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.2/n1000.subreads.bam "${BASE_DIR}"/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.2/n1000.subreads.bam "${BASE_DIR}"/
 
 # Truth Reference
-gsutil cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY.fa "${BASE_DIR}"/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY.fa "${BASE_DIR}"/
 # Truth exclude BED
-gsutil cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY_hifi.issues.bed "${BASE_DIR}"/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY_hifi.issues.bed "${BASE_DIR}"/
 # Truth split
-gsutil cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY.chrom_mapping.txt "${BASE_DIR}"/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/chm13v2.0_noY.chrom_mapping.txt "${BASE_DIR}"/
 
 cd "${BASE_DIR}"
 ```
diff --git a/docs/quick_start.md b/docs/quick_start.md
index 1e1cb18..7313b0a 100644
--- a/docs/quick_start.md
+++ b/docs/quick_start.md
@@ -112,10 +112,10 @@ QS_DIR="${HOME}/deepconsensus_quick_start"
 mkdir -p "${QS_DIR}" "${QS_DIR}/model"
 
 # Download the input PacBio Subread data.
-gsutil cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.2/n1000.subreads.bam "${QS_DIR}"/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.2/n1000.subreads.bam "${QS_DIR}"/
 
 # Download the DeepConsensus model.
-gsutil cp -r gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* "${QS_DIR}"/model/
+gcloud storage cp --recursive gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* "${QS_DIR}"/model/
 ```
 
 This directory should now contain the following files:
diff --git a/docs/train_model.md b/docs/train_model.md
index 5a874b7..e12ecf6 100644
--- a/docs/train_model.md
+++ b/docs/train_model.md
@@ -43,7 +43,7 @@ mkdir "${DC_TRAIN_DIR}"
 mkdir "${TF_EXAMPLES}"
 mkdir "${DC_TRAIN_OUTPUT}"
 
-gsutil -m cp -R gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/* "${TF_EXAMPLES}/"
+gcloud storage cp --recursive gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/* "${TF_EXAMPLES}/"
 ```
 
 The path to training examples has to be set in
diff --git a/docs/train_tpu_model.md b/docs/train_tpu_model.md
index 67a86f8..dec2c97 100644
--- a/docs/train_tpu_model.md
+++ b/docs/train_tpu_model.md
@@ -260,7 +260,7 @@ Copy DeepConsensus checkpoint locally:
 
 ```bash
 mkdir /mnt/disks/persist/model_checkpoint
-gsutil cp gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* /mnt/disks/persist/model_checkpoint/
+gcloud storage cp gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* /mnt/disks/persist/model_checkpoint/
 ```
 
 Add optional `--checkpoint` flag to
diff --git a/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb b/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb
index 2423264..2facbdc 100644
--- a/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb
+++ b/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb
@@ -383,10 +383,9 @@
       "source": [
         "# Download Model\n",
         "! mkdir -p deepconsensus_model\n",
-        "! gsutil cp -r gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* deepconsensus_model/\n",
+        "! gcloud storage cp --recursive gs://brain-genomics-public/research/deepconsensus/models/v1.2/model_checkpoint/* deepconsensus_model/\n",
         "# Download test data\n",
-        "! gsutil cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/test/tf-test-00000-of-00500.tfrecord.gz ./tf-test.tfrecord.gz"
-      ]
+        "! gcloud storage cp gs://brain-genomics-public/research/deepconsensus/training-tutorial/v1.2/test/tf-test-00000-of-00500.tfrecord.gz ./tf-test.tfrecord.gz"      ]
     },
     {
       "cell_type": "code",